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Developing machine learning frameworks to understand complex diseases and identify novel therapies.
Empowering the next generation of drug target identification, drug repositioning and precision medicine
The mission of our research group is to develop biostatistical and machine learning frameworks applied to biomedical data, to retrieve insights in the aetiology of complex diseases and identify novel intervention strategies. For this, we explore deep molecular characterised biomedical datasets, environmental factors, and tailor our models depending on disease specific knowledge gained through collaborations, literature and data driven analyses, thus empowering the next generation of drug target identification, drug repositioning and precision medicine.
We have strong expertise in computational method development for cancer pharmacogenomics including the analysis of monotherapy and drug combination high-throughput screens, and CRISPR lethality and drug resistance screens, which is highlighted by our ERC project and publication record.
The Menden Lab customises machine learning and biostatistical methods to predict drug sensitivity and synergy, as well as derived genetic biomarkers of these responses. Our work focuses on clinical translatability for enabling patient stratification based on deep molecular profiles, which is the key pillar of precision medicine.
The foundation of our endeavour is our strong expertise in Computational Cancer Pharmacogenomics (ERC StG), which we envision to generalise to Translational Computational Pharmacogenomics.
In particular, we expand our research focus to:
Common across all projects, we are experts in analysing biological models which are deep molecularly and phenotypic characterised, which ultimately enables precision medicine. In essence, our research vision is to establish a Translational Computational Pharmacogenomics programme in cancer and beyond, in order to accelerate the delivery of urgently needed targeted therapies.
Open-source tools and research initiatives driving scientific discovery
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Opportunities are available for student applicants and potential collaborators to join our research activities.
This research project is available to PhD students, Masters by Research, Honours students, Master of Biomedical Science students, and postdoctoral researchers as part of their thesis or research training.
Interested in applying or collaborating? Please email the Research Group Leader with your background and areas of interest.